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Morpheus at Recent & Upcoming Events
NHR Conference '25
Taking place in Göttingen in collaboration with
NHR@Göttingen
, the 3rd NHR Conference brings together high performance computing users …
Mon, 22 Sep 2025 10:00 +0200 — Thu, 25 Sep 2025 14:30 +0200
Aula am Waldweg, Göttingen, Germany
Models
Published Models
Mouse
Liver Zonation
Morpheus Model ID:
M6749
How does the architectural heterogeneity of the liver with its array of peri-central zones lead to the metabolic zonation across the liver lobule? Introduction Liver micro-architecture is set by an array of central veins interspersed with portal triads.
E. Kolbe
,
S. Aleithe
,
C. Rennert
,
L. Spormann
,
F. Ott
,
D. Meierhofer
,
R. Gajowski
,
C. Stöpel
,
S. Hoehme
,
M. Kücken
,
L. Brusch
,
M. Seifert
,
W. von Schoenfels
,
C. Schafmayer
,
M. Brosch
,
U. Hofmann
,
G. Damm
,
D. Seehofer
,
J. Hampe
,
R. Gebhardt
,
M. Matz-Soja
(Authors)
M. Kücken
,
M. Seifert
,
L. Brusch
(Contributors)
Models
Published Models
Mouse
Hepatocellular Carcinoma
Morpheus Model ID:
M9148
Hepatocyte–sinusoid alignment (HSA) causes asymmetric shapes in early hepatocellular tumors. Introduction The mammalian liver is subdivided into lobes and further into thousands of hexagonal columns, called lobules, which act in parallel.
S. Höhme
,
F. Bertaux
,
W. Weens
,
B. Grasl-Kraupp
,
J. G. Hengstler
,
D. Drasdo
(Authors)
L. Brusch
,
D. Jahn
(Contributors)
Models
Published Models
Mouse
Liver Regeneration from CCl4
Morpheus Model ID:
M9147
Hepatocyte–sinusoid alignment (HSA) supports the coordination of hepatocytes during liver regeneration after damage by carbon tetrachloride. Introduction The regenerative capacity of the mammalian liver did already inspire the fate of Prometheus in Greek Myth but it still poses many questions today that call for spatio-temporal multicellular modeling.
S. Höhme
,
M. Brulport
,
A. Bauer
,
E. Bedawy
,
W. Schormann
,
M. Hermes
,
V. Puppe
,
R. Gebhardt
,
S. Zellmer
,
M. Schwarz
,
E. Bockamp
,
T. Timmel
,
J. G. Hengstler
,
D. Drasdo
(Authors)
D. Jahn
,
L. Brusch
(Contributors)
Morpheus at Recent & Upcoming Events
Modeling Workshop of LiSyM-Cancer
LiSyM-Cancer is a multidisciplinary research network for systems medicine with the focus on liver cancer, its development from …
Wed, 29 Mar 2023
Center for Regenerative Therapies Dresden (CRTD), Technische Universität Dresden
Models
Published Models
Human
Detoxification and Liver Injury from Acetaminophen (APAP)
Morpheus Model ID:
M9496
This multiscale mechanistic liver lobule model is composed of various interacting cell types, such as hepatocytes, residential Kupffer cells and macrophages. It captures hepatocellular acetaminophen (APAP) metabolism, DNA damage response activation, necrotic cell death, macrophage recruitment and the regulation of hepatocellular senescence and proliferation, with qualitatively different outcomes as a function of the initial APAP concentration in blood plasma.
M. M. Heldring
,
A. H. Shaw
,
J. B. Beltman
(Authors)
L. Brusch
(Contributor)
DOI:10.1038/s41540-022-00238-5
Selected Publications
Unraveling the effect of intra- and intercellular processes on acetaminophen-induced liver injury
In high dosages, acetaminophen (APAP) can cause severe liver damage, but susceptibility to liver failure varies across individuals and …
M. M. Heldring
,
A. H. Shaw
,
J. B. Beltman
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Cite
Code
DOI
Model
Models
Contributed Examples
PDE
Diffusion in Liver Lobule
Morpheus Model ID:
M7991
Diffusion in Liver Lobule Introduction This model considers diffusion of a marker with concentration $c(x,y,t)$ across a liver lobule. The lobule is patterned into a central zone around the central vein (center of simulation domain) and portal zones around (here six) portal triads that here act as sinks ($c = 0$).
M. Kücken
,
L. Brusch
(Authors)
L. Brusch
(Contributor)
Models
Published Models
Mouse
Tissue Size Control
Morpheus Model ID:
M7990
Bile Pressure Drives YAP Signaling During Liver Regeneration Introduction During development and regeneration, tissues must grow to the proper size. But tissue growth is just the result of independent cell cycle control systems in the individual cells.
L. Brusch
(Author)
L. Brusch
(Contributor)
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