In this course, we have shown how to convert a 1D PDE model into a 3D multiscale tissue model in Morpheus using 3 steps:

  1. Convert a PDE model into a cell-discrete diffusion model,
  2. add motility and cell mechanics using cellular Potts sampling,
  3. couple intracellular dynamics and tissue mechanics.

I hope each step was clear enough to inspire you to experiment around!

Our next course is about Drawing Cell Genealogies.